20120806T063513: *: <== :rubikcube_work!~quassel@134.76.218.252 JOIN #fiji-devel 20120806T122430: *: <== :jtrucks!~jtrucks@freenode/staff/lopsa.board.jtrucks NOTICE $$* :[GLOBAL NOTICE] The human eye is a wonderful device. With a little effort, it can fail to see even the most glaring injustice. 20120806T144427: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu QUIT :Quit: dscho 20120806T144616: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu JOIN #fiji-devel 20120806T144616: *: <== :ChanServ!ChanServ@services. MODE #fiji-devel +o dscho 20120806T145054: *: <== :ctrueden!~ctrueden@dyn-144-92-48-222.microscopy.wisc.edu JOIN #fiji-devel 20120806T145308: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu QUIT :*.net *.split 20120806T145324: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu JOIN #fiji-devel 20120806T145324: *: <== :ChanServ!ChanServ@services. MODE #fiji-devel +o dscho 20120806T173926: *: <== :qwebirc13089!905c30e5@gateway/web/freenode/ip.144.92.48.229 JOIN #fiji-devel 20120806T173927: *: <== :qwebirc13089!905c30e5@gateway/web/freenode/ip.144.92.48.229 NICK :lstuyvenberg 20120806T173927: qwebirc13089# lstuyvenberg 20120806T182433: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :dscho: My line-inversion hack seems to have been wrong. Remember how the X and Y seemed to be working for multi-view, but the Z wouldn't? It does not. 20120806T182433: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: dscho: My line-inversion hack seems to have been wrong. Remember how the X and Y seemed to be working for multi-view, but the Z wouldn't? It does not. 20120806T182440: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :s/not/now 20120806T182440: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: s/not/now 20120806T182516: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :lstuyvenberg: cool! 20120806T182516: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: lstuyvenberg: cool! 20120806T182531: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Does that mean that now not only X and Y are correctly inferred given the rotation axis, but also Z? 20120806T182531: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Does that mean that now not only X and Y are correctly inferred given the rotation axis, but also Z? 20120806T182557: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :They seem to be, yes. It's not perfect, but I assume fusion will take care of things like pixel offsets. 20120806T182557: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: They seem to be, yes. It's not perfect, but I assume fusion will take care of things like pixel offsets. 20120806T182606: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Yes. 20120806T182606: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Yes. 20120806T182617: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :This is great news! 20120806T182617: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: This is great news! 20120806T182620: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :So long as the image remains in the field of view, and in focus. 20120806T182620: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: So long as the image remains in the field of view, and in focus. 20120806T182621: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Yup. :D 20120806T182621: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Yup. :D 20120806T182639: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Now I really need to sit down my donkey and work out that bounding-box thing. 20120806T182639: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Now I really need to sit down my donkey and work out that bounding-box thing. 20120806T182647: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Heh. 20120806T182647: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Heh. 20120806T182733: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :So question, where do you suggest I go from here? Automation of the calibration, or implementing that rotation into acquisition? 20120806T182733: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: So question, where do you suggest I go from here? Automation of the calibration, or implementing that rotation into acquisition? 20120806T182816: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :The latter. 20120806T182816: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: The latter. 20120806T182830: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :My thoughts also. 20120806T182830: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: My thoughts also. 20120806T182835: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :We can always automate the calibration while they have a calibrated system and do time-lapses. 20120806T182835: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: We can always automate the calibration while they have a calibrated system and do time-lapses. 20120806T182840: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Yep. 20120806T182840: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Yep. 20120806T182859: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :How can we make sure that they get their system calibrated? 20120806T182859: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: How can we make sure that they get their system calibrated? 20120806T182929: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Well, the calibration is literally a member object of the SPIMAcquisition class. 20120806T182929: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Well, the calibration is literally a member object of the SPIMAcquisition class. 20120806T182931: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Do you think your current calibrator is easy enough to use? 20120806T182931: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Do you think your current calibrator is easy enough to use? 20120806T182944: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :If I write up proper instructions, it shouldn't be too bad. 20120806T182944: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: If I write up proper instructions, it shouldn't be too bad. 20120806T182954: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Good, then that's another ticket ;-) 20120806T182954: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Good, then that's another ticket ;-) 20120806T182958: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Adding it. 20120806T182958: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Adding it. 20120806T183002: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Thanks! 20120806T183002: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Thanks! 20120806T183154: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :I'm mildly concerned about the reliability, though. I'll probably add a 'tips' section for making sure the calibration is as accurate as possible... 20120806T183154: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: I'm mildly concerned about the reliability, though. I'll probably add a 'tips' section for making sure the calibration is as accurate as possible... 20120806T183201: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Hehe. 20120806T183201: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Hehe. 20120806T183212: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Well, we already have a ticket about assessing the precision of the motors. 20120806T183212: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Well, we already have a ticket about assessing the precision of the motors. 20120806T183225: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :It's a software issue I'm concerned with: 20120806T183225: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: It's a software issue I'm concerned with: 20120806T183243: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :I used a small step size earlier (5 steps), and it said the rotational axis Z was at ~500. Which was very much incorrect. 20120806T183243: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: I used a small step size earlier (5 steps), and it said the rotational axis Z was at ~500. Which was very much incorrect. 20120806T183311: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :The other problem, though, was that I picked a bead near the center of the axis, so it didn't move much in Z at all. 20120806T183311: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: The other problem, though, was that I picked a bead near the center of the axis, so it didn't move much in Z at all. 20120806T183326: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :I'm going to suggest large step sizes, and beads near the edge of the column. 20120806T183326: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: I'm going to suggest large step sizes, and beads near the edge of the column. 20120806T183405: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Good idea. 20120806T183405: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Good idea. 20120806T183845: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Okay, I cannot see how we can make the calibration work with just two measurements. But it is pretty easy with 4 measurements at theta={0, 90, 180, 270}. 20120806T183845: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Okay, I cannot see how we can make the calibration work with just two measurements. But it is pretty easy with 4 measurements at theta={0, 90, 180, 270}. 20120806T183906: *: <== :oosp!~oosp@cpc8-slam5-2-0-cust233.2-4.cable.virginmedia.com QUIT :Excess Flood 20120806T183917: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Basically, at theta=0 and theta=180, we look at the specimen parallel to z. 20120806T183917: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Basically, at theta=0 and theta=180, we look at the specimen parallel to z. 20120806T184021: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :If we take the vertical center line of the object from both of these angles, we get two different x values. If the rotation axis is perfectly vertical, it must be exactly between these two x values. 20120806T184021: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: If we take the vertical center line of the object from both of these angles, we get two different x values. If the rotation axis is perfectly vertical, it must be exactly between these two x values. 20120806T184030: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Same for theta={90,270} and z. 20120806T184030: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Same for theta={90,270} and z. 20120806T184054: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Makes sense? 20120806T184054: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Makes sense? 20120806T184323: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Okay. It still assumes a perfectly vertical rotation axis, but that's a reasonable approximation. 20120806T184323: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Okay. It still assumes a perfectly vertical rotation axis, but that's a reasonable approximation. 20120806T184348: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :(My latest calibration had a 0.001, 1.000, -0.001 axis -- there was some rounding.) 20120806T184348: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: (My latest calibration had a 0.001, 1.000, -0.001 axis -- there was some rounding.) 20120806T184501: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Sorry, 0.007 for X/Z. So not quite so perfect. 20120806T184501: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Sorry, 0.007 for X/Z. So not quite so perfect. 20120806T184533: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :It'll be good enough for initial calibration, I think. 20120806T184533: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: It'll be good enough for initial calibration, I think. 20120806T184559: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Once we have an initial calibration, we can track a single particle to refine the calibration. 20120806T184559: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Once we have an initial calibration, we can track a single particle to refine the calibration. 20120806T184651: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :So the user will pick the sample's bounding box from these four angles, from which we'll find what is probably quite close to the axis' location. 20120806T184651: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: So the user will pick the sample's bounding box from these four angles, from which we'll find what is probably quite close to the axis' location. 20120806T184705: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Then either they'll suggest a particle, or we'll just pick one, and the system will step through a circle and fit it? 20120806T184705: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Then either they'll suggest a particle, or we'll just pick one, and the system will step through a circle and fit it? 20120806T184724: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :That'd be a good strategy, I think, yes. 20120806T184724: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: That'd be a good strategy, I think, yes. 20120806T184728: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Sounds good. 20120806T184728: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Sounds good. 20120806T184733: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :The auto-pick might not work, though. 20120806T184733: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: The auto-pick might not work, though. 20120806T184801: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :But it is probably a sensible thing to ask the user to find one (also because they might take the chance to exchange the sample with a bead sample. 20120806T184801: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: But it is probably a sensible thing to ask the user to find one (also because they might take the chance to exchange the sample with a bead sample. 20120806T184815: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Ah, true. 20120806T184815: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Ah, true. 20120806T184845: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :I'm going to do a little git work and then get started on that then. How's the updater coming along? 20120806T184845: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: I'm going to do a little git work and then get started on that then. How's the updater coming along? 20120806T184849: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :In the hope that fiddling that much with the sample holder will not change the axis too much. 20120806T184849: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: In the hope that fiddling that much with the sample holder will not change the axis too much. 20120806T184858: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Yes, it is coming along :-D 20120806T184858: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Yes, it is coming along :-D 20120806T184921: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Yeah, that's one of the other things I'm concerned about, although I think we have a ticket for a more stable sample holder, also... 20120806T184921: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Yeah, that's one of the other things I'm concerned about, although I think we have a ticket for a more stable sample holder, also... 20120806T185009: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Right. One step at a time... 20120806T185009: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Right. One step at a time... 20120806T185452: *: <== :oosp!~oosp@cpc8-slam5-2-0-cust233.2-4.cable.virginmedia.com JOIN #fiji-devel 20120806T185545: *: <== :rubikcube_work!~quassel@134.76.218.252 QUIT :Ping timeout: 246 seconds 20120806T193955: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 JOIN #fiji-devel 20120806T194101: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Well, I may have been overzealous about the accuracy of the Z fixing. I'll keep work on it. But the X/Y synchronization seems to work fairly well; it kept the strange shape in view at all times... 20120806T194101: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Well, I may have been overzealous about the accuracy of the Z fixing. I'll keep work on it. But the X/Y synchronization seems to work fairly well; it kept the strange shape in view at all times... 20120806T194133: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :The focus leaves something to be desired though. 20120806T194133: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: The focus leaves something to be desired though. 20120806T194216: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :That could also be a mistake in assuming that the view was focused. 20120806T194216: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: That could also be a mistake in assuming that the view was focused. 20120806T194230: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :lstuyvenberg: do you think the focus has to do with the light-sheet calibration being unstable? 20120806T194230: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: lstuyvenberg: do you think the focus has to do with the light-sheet calibration being unstable? 20120806T194245: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :Well, I was using transmitted light for that run. 20120806T194245: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: Well, I was using transmitted light for that run. 20120806T194254: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :So it's possible what I thought was 'focused' was not. 20120806T194254: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: So it's possible what I thought was 'focused' was not. 20120806T194354: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Ah, right. 20120806T194354: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Ah, right. 20120806T194526: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :Hello again, sorry to interrupt any ongoing conversations. Last week I enquired about exporting segmented line ROIs to SVG. I've made some progress in the form of a Jython plugin, but forgot to ask about how to get the coordinates for each node in the segmented line. Is there some builtin ImageJ class and method that returns those values? Thanks! 20120806T194526: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: Hello again, sorry to interrupt any ongoing conversations. Last week I enquired about exporting segmented line ROIs to SVG. I've made some progress in the form of a Jython plugin, but forgot to ask about how to get the coordinates for each node in the segmented line. Is there some builtin ImageJ class and method that returns those values? Thanks! 20120806T194741: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :qwebirc44707: I saw some remarks on the inkscape forum. 20120806T194741: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: qwebirc44707: I saw some remarks on the inkscape forum. 20120806T194755: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :http://www.inkscapeforum.com/viewtopic.php?f=5&t=12512 20120806T194755: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: http://www.inkscapeforum.com/viewtopic.php?f=5&t=12512 20120806T194810: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Unfortunately, my message is still in the moderation queue. 20120806T194810: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Unfortunately, my message is still in the moderation queue. 20120806T194837: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :I was quite surprised to see this message! It makes it look like we did not help you to write the plugin at all, but more like you did not write anything. 20120806T194837: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: I was quite surprised to see this message! It makes it look like we did not help you to write the plugin at all, but more like you did not write anything. 20120806T195112: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :Sorry I was not clear in the forum post, as I did not provide sufficient description of last week's IRC conversation in the post. 20120806T195112: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: Sorry I was not clear in the forum post, as I did not provide sufficient description of last week's IRC conversation in the post. 20120806T195252: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :In fact I should edit that post to include the specific suggestions from that conversation. On the other hand it may involve pasting Fiji specific code not directly related to Inkscape. 20120806T195252: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: In fact I should edit that post to include the specific suggestions from that conversation. On the other hand it may involve pasting Fiji specific code not directly related to Inkscape. 20120806T195327: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :Well, be that as it may, the impression it leaves is that I did not help at all, methinks. 20120806T195327: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: Well, be that as it may, the impression it leaves is that I did not help at all, methinks. 20120806T195402: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :Anyway I apologise for not fully and clearly attributing the help I got here last week, I will edit the post to clarify that. 20120806T195402: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: Anyway I apologise for not fully and clearly attributing the help I got here last week, I will edit the post to clarify that. 20120806T195451: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :No need to. 20120806T195451: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: No need to. 20120806T195453: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :I certainly did not mean to say I didn't receive any help at al... 20120806T195453: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: I certainly did not mean to say I didn't receive any help at al... 20120806T195457: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PRIVMSG #fiji-devel :Sorry about that. 20120806T195457: qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90: Sorry about that. 20120806T203200: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :dscho: I have to head out, but I left a rotational sequence of images in the dropbox public (after clearing out some of my old, large acquisitions -- they're only on this machine, now); multiview_first_steps.tif 20120806T203200: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: dscho: I have to head out, but I left a rotational sequence of images in the dropbox public (after clearing out some of my old, large acquisitions -- they're only on this machine, now); multiview_first_steps.tif 20120806T203215: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 PRIVMSG #fiji-devel :It's the strange shape from before, with a bit of transmitted light, but mostly laser. 20120806T203215: lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229: It's the strange shape from before, with a bit of transmitted light, but mostly laser. 20120806T203228: *: <== :lstuyvenberg!905c30e5@gateway/web/freenode/ip.144.92.48.229 QUIT :Quit: Off I go... 20120806T205541: *: <== :ctrueden!~ctrueden@dyn-144-92-48-222.microscopy.wisc.edu QUIT :Quit: Leaving. 20120806T205610: *: <== :dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu PRIVMSG #fiji-devel :ctrueden: FWIW I am really seriously considering to develop the (trivial) Maven plugin to copy things into place in an ImageJ.app/ directory. I.e. it will copy plugins into plugins/, libraries into jars/. And it should know about native libraries and executables and copying them into place. 20120806T205610: dscho!~gene099@dyn-144-92-48-243.microscopy.wisc.edu: ctrueden: FWIW I am really seriously considering to develop the (trivial) Maven plugin to copy things into place in an ImageJ.app/ directory. I.e. it will copy plugins into plugins/, libraries into jars/. And it should know about native libraries and executables and copying them into place. 20120806T213100: *: <== :qwebirc44707!4b664f5a@gateway/web/freenode/ip.75.102.79.90 PART #fiji-devel